Daily PhyloSift Benchmarks

As we code away here at UC Davis, we’ve been keeping track of PhyloSift’s accuracy and performance using daily benchmarks on simulated data. These benchmarks are carried out using the latest versions of the PhyloSift code available on github (master and development branches).

Click the link below to access graphs showcasing a history of how the PhyloSift pipeline has changed during the course of its development. Here we provide information for simulated Illumina and 454 data, as well as information about PhyloSift compute time for each dataset (running on a single-core).

Daily PhyloSift benchmarks on Simulated Data

Note that these benchmarking plots are permanently accessible via the “Quick Links” sidebar located on the righthand side of the PhyloSift homepage.